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Pull requests: nf-core/modules

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211 Open 8,719 Closed
211 Open 8,719 Closed
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Pull requests list

Swap poolsnp to topics size/m
#12282 opened Jul 8, 2026 by SPPearce Contributor • Draft
17 tasks
Add plink2/pmerge module
#12281 opened Jul 8, 2026 by lyh970817 Contributor • Draft
14 tasks done
Add plink2/king module
#12280 opened Jul 8, 2026 by lyh970817 Contributor • Draft
14 tasks done
Add plink/splitx module
#12279 opened Jul 8, 2026 by lyh970817 Contributor • Draft
14 tasks done
Add plink/maf module
#12278 opened Jul 8, 2026 by lyh970817 Contributor • Draft
14 tasks done
Add plink/bmerge module
#12277 opened Jul 8, 2026 by lyh970817 Contributor • Draft
14 tasks done
2
Add plink/ibc module
#12276 opened Jul 8, 2026 by lyh970817 Contributor • Draft
14 tasks done
Add plink/hwefilter module
#12275 opened Jul 8, 2026 by lyh970817 Contributor • Draft
14 tasks done
Add plink/checksex module
#12274 opened Jul 8, 2026 by lyh970817 Contributor • Draft
14 tasks done
Add plink/missing module
#12273 opened Jul 8, 2026 by lyh970817 Contributor • Draft
14 tasks done
4
chore(busco/{busco,download}): update containers and clean
#12272 opened Jul 8, 2026 by dialvarezs Member Loading…
2 of 17 tasks
feat (closes #7246): add new component: leafcutter/differentialsplicing
#12271 opened Jul 7, 2026 by JTL-lab Contributor Loading…
14 of 17 tasks
1
RGI/BWT: add files to generate actual result size/s
#12270 opened Jul 7, 2026 by nickp60 Contributor Loading…
4 of 17 tasks
Add rclone check and checksum Ready for Review
#12269 opened Jul 7, 2026 by atrigila Contributor Loading…
@atrigila @delfiterradas
3
Swap verifybamid to topic size/m
#12262 opened Jul 7, 2026 by SPPearce Contributor Loading…
1
Update to topic motus/*
#12261 opened Jul 7, 2026 by LouisLeNezet Contributor Loading…
17 tasks
4
@LouisLeNezet
add new module: aardvark/compare
#12260 opened Jul 7, 2026 by kubranarci Contributor Loading…
9 of 17 tasks
@kubranarci
6
Add meta maps to cellranger ref modules and downstream consumers
#12257 opened Jul 7, 2026 by nictru Contributor Loading…
13
Update to topic metaspace/*
#12247 opened Jul 6, 2026 by LouisLeNezet Contributor Loading…
17 tasks
2
@LouisLeNezet
1
Update to topic metamaps/*
#12246 opened Jul 6, 2026 by LouisLeNezet Contributor Loading…
17 tasks
2
@LouisLeNezet
4
new module: fastaguard
#12239 opened Jul 3, 2026 by ehsanestaji Contributor Loading…
14 of 15 tasks
9
Add new subworkflow: ubam_align_minimap2
#12238 opened Jul 3, 2026 by manascripts Member Loading…
7 of 17 tasks
Update deacon module
#12236 opened Jul 3, 2026 by sofstam Contributor Loading…
17 tasks
Add subworkflow: fastq_align_minimap2 Ready for Review size/m
#12235 opened Jul 3, 2026 by manascripts Member Loading…
8 of 17 tasks
gstama_polyacleanup: Fixed regression - Fixing output glob awaiting-changes will be closed after 30 days
#12228 opened Jul 2, 2026 by sguizard Contributor Loading…
3
ProTip! Updated in the last three days: updated:>2026-07-04.